Difference between revisions of "SELENOCYSTEINE-LYASE-RXN"

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(Created page with "Category:reaction == Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16] == Reactio...")
(Created page with "Category:reaction == Reaction SELENOCYSTEINE-LYASE-RXN == * direction: ** left-to-right * common-name: ** selenocysteine lyase * ec-number: ** [http://enzyme.expasy.org/EC...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN ==
+
== Reaction SELENOCYSTEINE-LYASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** selenocysteine lyase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16]
+
** [http://enzyme.expasy.org/EC/4.4.1.16 ec-4.4.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Donor-H2]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SE-2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ17324]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13485]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ19133]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03223]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2942]], L-lysine biosynthesis III:
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR107706
+
* METANETX-RXN : MNXR123878
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03599 R03599]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13564 13564]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11632 11632]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02755 R02755]
+
{{#set: common-name=selenocysteine lyase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-4.4.1.16}}
−
** [http://www.uniprot.org/uniprot/P04964 P04964]
+
{{#set: nb gene associated=4}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=0}}
−
{{#set: ec-number=ec-1.4.1.16}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: nb gene associated=0}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}
−
{{#set: reconstruction tool=curation}}
 
−
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
 
−
{{#set: reconstruction source=previous_meneco}}
 

Latest revision as of 11:20, 18 March 2021

Reaction SELENOCYSTEINE-LYASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • selenocysteine lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR123878
  • LIGAND-RXN:
  • RHEA:





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