Difference between revisions of "SERINE-O-ACETTRAN-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7752 PWY-7752] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-7742 tax-77...")
(Created page with "Category:reaction == Reaction 2.5.1.19-RXN == * direction: ** reversible * common-name: ** 3-phosphoshikimate-1-carboxyvinyltransferase * ec-number: ** [http://enzyme.expa...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7752 PWY-7752] ==
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== Reaction 2.5.1.19-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-7742 tax-7742]
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** reversible
 
* common-name:
 
* common-name:
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** gadusol biosynthesis
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** 3-phosphoshikimate-1-carboxyvinyltransferase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-9140]]
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** [http://enzyme.expasy.org/EC/2.5.1.19 ec-2.5.1.19]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17375 RXN-17375]
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* 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[SHIKIMATE-5P]][c] '''<=>''' 1 [[3-ENOLPYRUVYL-SHIKIMATE-5P]][c] '''+''' 1 [[Pi]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17364 RXN-17364]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-7742}}
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* Gene: [[SJ10493]]
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{{#set: common-name=gadusol biosynthesis}}
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** Category: [[annotation]]
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{{#set: nb reaction found=1}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.33}}
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* Gene: [[SJ06122]]
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{{#set: nb total reaction=3}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
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** '''6''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21259 21259]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03460 R03460]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P22299 P22299]
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P22487 P22487]
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** [http://www.uniprot.org/uniprot/P52312 P52312]
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** [http://www.uniprot.org/uniprot/Q9JTT3 Q9JTT3]
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** [http://www.uniprot.org/uniprot/Q03421 Q03421]
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** [http://www.uniprot.org/uniprot/P19786 P19786]
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** [http://www.uniprot.org/uniprot/P17688 P17688]
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** [http://www.uniprot.org/uniprot/P24497 P24497]
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** [http://www.uniprot.org/uniprot/P23981 P23981]
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** [http://www.uniprot.org/uniprot/P23281 P23281]
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** [http://www.uniprot.org/uniprot/Q04570 Q04570]
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** [http://www.uniprot.org/uniprot/P43905 P43905]
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** [http://www.uniprot.org/uniprot/Q59975 Q59975]
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** [http://www.uniprot.org/uniprot/P12421 P12421]
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** [http://www.uniprot.org/uniprot/P07637 P07637]
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** [http://www.uniprot.org/uniprot/P19688 P19688]
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** [http://www.uniprot.org/uniprot/P0A6D3 P0A6D3]
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** [http://www.uniprot.org/uniprot/P11043 P11043]
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</div>
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{{#set: direction=reversible}}
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{{#set: common-name=3-phosphoshikimate-1-carboxyvinyltransferase}}
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{{#set: ec-number=ec-2.5.1.19}}
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{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:46, 18 December 2020

Reaction 2.5.1.19-RXN

  • direction:
    • reversible
  • common-name:
    • 3-phosphoshikimate-1-carboxyvinyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate:
    • 6 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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