Difference between revisions of "SEROTONIN"

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(Created page with "Category:gene == Gene SJ00348 == * transcription-direction: ** positive * right-end-position: ** 62269 * left-end-position: ** 57108 * centisome-position: ** 33.94376...")
(Created page with "Category:metabolite == Metabolite CPD-6224 == * common-name: ** gibberellin a34 * smiles: ** c=c1(c3(cc4(c1)(c([ch]5(c2(c(=o)oc(cc(o)c(o)2)([ch](cc3)4)5)(c)))c([o-])=o)))...")
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[[Category:gene]]
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[[Category:metabolite]]
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== Gene SJ00348 ==
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== Metabolite CPD-6224 ==
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* transcription-direction:
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* common-name:
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** positive
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** gibberellin a34
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* right-end-position:
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* smiles:
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** 62269
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** c=c1(c3(cc4(c1)(c([ch]5(c2(c(=o)oc(cc(o)c(o)2)([ch](cc3)4)5)(c)))c([o-])=o)))
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* left-end-position:
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* inchi-key:
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** 57108
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** igziqajjxgrajf-oqaxfvlusa-m
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* centisome-position:
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* molecular-weight:
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** 33.94376   
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** 347.387
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-6550]]
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* [[GAPDHSYNEC-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=gibberellin a34}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=igziqajjxgrajf-oqaxfvlusa-m}}
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* [[GAPOXNPHOSPHN-RXN]]
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{{#set: molecular-weight=347.387}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* [[RXN-15115]]
 
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** Category: [[orthology]]
 
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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== Pathway(s) associated ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* [[GLUCONEO-PWY]]
 
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** '''12''' reactions found over '''13''' reactions in the full pathway
 
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* [[P124-PWY]]
 
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** '''12''' reactions found over '''15''' reactions in the full pathway
 
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* [[P185-PWY]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[P122-PWY]]
 
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** '''16''' reactions found over '''18''' reactions in the full pathway
 
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* [[PWY-5484]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[PWY-1042]]
 
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** '''9''' reactions found over '''10''' reactions in the full pathway
 
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* [[GLYCOLYSIS]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[ANAGLYCOLYSIS-PWY]]
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
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* [[SUCSYN-PWY]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY66-399]]
 
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** '''11''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-6901]]
 
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** '''10''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7003]]
 
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** '''8''' reactions found over '''6''' reactions in the full pathway
 
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</div>
 
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{{#set: transcription-direction=positive}}
 
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{{#set: right-end-position=62269}}
 
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{{#set: left-end-position=57108}}
 
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{{#set: centisome-position=33.94376    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
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{{#set: nb reaction associated=3}}
 
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{{#set: nb pathway associated=12}}
 

Revision as of 20:30, 18 December 2020

Metabolite CPD-6224

  • common-name:
    • gibberellin a34
  • smiles:
    • c=c1(c3(cc4(c1)(c([ch]5(c2(c(=o)oc(cc(o)c(o)2)([ch](cc3)4)5)(c)))c([o-])=o)))
  • inchi-key:
    • igziqajjxgrajf-oqaxfvlusa-m
  • molecular-weight:
    • 347.387

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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