Difference between revisions of "SHIKIMATE"

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(Created page with "Category:gene == Gene SJ20814 == * transcription-direction: ** positive * right-end-position: ** 47241 * left-end-position: ** 14830 * centisome-position: ** 7.2954283...")
(Created page with "Category:metabolite == Metabolite SHIKIMATE == * common-name: ** shikimate * smiles: ** c1(=c(cc(c(o)c(o)1)o)c(=o)[o-]) * inchi-key: ** jxohggnkmltubp-hsuxutppsa-m * molec...")
 
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[[Category:gene]]
+
[[Category:metabolite]]
== Gene SJ20814 ==
+
== Metabolite SHIKIMATE ==
* transcription-direction:
+
* common-name:
** positive
+
** shikimate
* right-end-position:
+
* smiles:
** 47241
+
** c1(=c(cc(c(o)c(o)1)o)c(=o)[o-])
* left-end-position:
+
* inchi-key:
** 14830
+
** jxohggnkmltubp-hsuxutppsa-m
* centisome-position:
+
* molecular-weight:
** 7.2954283   
+
** 173.145
== Organism(s) associated with this gene  ==
+
== Reaction(s) known to consume the compound ==
* [[S.japonica_carotenoid_curated]]
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* [[RXN-7968]]
== Reaction(s) associated ==
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* [[SHIKIMATE-KINASE-RXN]]
* [[CELLULOSE-SYNTHASE-UDP-FORMING-RXN]]
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== Reaction(s) known to produce the compound ==
** Category: [[annotation]]
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* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[SHIKIMATE-KINASE-RXN]]
** Category: [[orthology]]
+
== Reaction(s) of unknown directionality ==
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: common-name=shikimate}}
* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
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{{#set: inchi-key=inchikey=jxohggnkmltubp-hsuxutppsa-m}}
** Category: [[annotation]]
+
{{#set: molecular-weight=173.145}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-1001]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=47241}}
 
{{#set: left-end-position=14830}}
 
{{#set: centisome-position=7.2954283    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:14, 18 March 2021

Metabolite SHIKIMATE

  • common-name:
    • shikimate
  • smiles:
    • c1(=c(cc(c(o)c(o)1)o)c(=o)[o-])
  • inchi-key:
    • jxohggnkmltubp-hsuxutppsa-m
  • molecular-weight:
    • 173.145

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality