Difference between revisions of "SINAPATE"

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(Created page with "Category:gene == Gene SJ04962 == * transcription-direction: ** positive * right-end-position: ** 347786 * left-end-position: ** 337319 * centisome-position: ** 34.93239...")
(Created page with "Category:gene == Gene SJ03414 == * transcription-direction: ** negative * right-end-position: ** 27898 * left-end-position: ** 6761 * centisome-position: ** 5.574198 =...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04962 ==
+
== Gene SJ03414 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 347786
+
** 27898
 
* left-end-position:
 
* left-end-position:
−
** 337319
+
** 6761
 
* centisome-position:
 
* centisome-position:
−
** 34.93239    
+
** 5.574198    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12496]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN1F-150]]
+
{{#set: transcription-direction=negative}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=27898}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=6761}}
−
** Category: [[orthology]]
+
{{#set: centisome-position=5.574198   }}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN1F-151]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7591]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7938]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7939]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5943]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=347786}}
 
−
{{#set: left-end-position=337319}}
 
−
{{#set: centisome-position=34.93239   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=4}}
 

Revision as of 09:27, 27 August 2019

Gene SJ03414

  • transcription-direction:
    • negative
  • right-end-position:
    • 27898
  • left-end-position:
    • 6761
  • centisome-position:
    • 5.574198

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SINAPATE&oldid=32616"