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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2601 RXN0-2601] == | + | == Metabolite SIROHEME == |
| − | * direction:
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| − | ** left-to-right
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| | * common-name: | | * common-name: |
| − | ** dna-(apurinic or apyrimidinic site) lyase | + | ** siroheme |
| − | ** dna glycosylase | + | * smiles: |
| − | * ec-number:
| + | ** cc4(cc(=o)[o-])(c(ccc(=o)[o-])c6(=cc8(=c(cc([o-])=o)c(ccc(=o)[o-])=c7(n([fe--]25([n+]1(c(c(ccc([o-])=o)=c(cc(=o)[o-])c=1c=c3(c(c)(cc(=o)[o-])c(ccc(=o)[o-])c(n23)=cc4=[n+]56))=c7)))8)))) |
| − | ** [http://enzyme.expasy.org/EC/4.2.99.18 ec-4.2.99.18] | + | * inchi-key: |
| − | == Reaction formula == | + | ** dlkssihhlynikn-qiiswyhfsa-d |
| − | * 1 [[Damaged-DNA-Pyrimidine]][c] '''=>''' 1 [[DNA-containing-a-Apyrimidinic-Sites]][c]
| + | * molecular-weight: |
| − | == Gene(s) associated with this reaction == | + | ** 908.611 |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | == Reaction(s) known to consume the compound == |
| − | * Gene: [[SJ01041]]
| + | == Reaction(s) known to produce the compound == |
| − | ** Category: [[orthology]]
| + | * [[SIROHEME-FERROCHELAT-RXN]] |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | == Reaction(s) of unknown directionality == |
| − | * Gene: [[SJ12112]]
| + | {{#set: common-name=siroheme}} |
| − | ** Category: [[orthology]]
| + | {{#set: inchi-key=inchikey=dlkssihhlynikn-qiiswyhfsa-d}} |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: molecular-weight=908.611}} |
| − | * Gene: [[SJ17648]]
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ01489]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ10690]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12532]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | * Gene: [[SJ04992]]
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| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ04314]]
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| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12201]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ00230]] | |
| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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| − | * Gene: [[SJ12275]]
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| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ18415]]
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| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | </div>
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| − | == Pathway(s) == | |
| − | == Reconstruction information == | |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links == | |
| − | {{#set: direction=left-to-right}}
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| − | {{#set: common-name=dna glycosylase|dna-(apurinic or apyrimidinic site) lyase}} | |
| − | {{#set: ec-number=ec-4.2.99.18}} | |
| − | {{#set: nb gene associated=12}} | |
| − | {{#set: nb pathway associated=0}}
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| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
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