Difference between revisions of "SJ00005"
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(Created page with "Category:gene == Gene SJ06328 == * transcription-direction: ** negative * right-end-position: ** 37871 * left-end-position: ** 32088 * centisome-position: ** 39.720737...") |
(Created page with "Category:gene == Gene SJ11469 == * transcription-direction: ** positive * right-end-position: ** 1271 * left-end-position: ** 56 * centisome-position: ** 1.506777700e-2 ==...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ11469 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 1271 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 56 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 1.506777700e-2 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[BTUR2-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[COBALADENOSYLTRANS-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
| − | {{#set: right-end-position= | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[R344-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[COBALSYN-PWY]] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-6269]] | ||
| + | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-6268]] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7962]] | ||
| + | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=1271}} | ||
| + | {{#set: left-end-position=56}} | ||
| + | {{#set: centisome-position=1.506777700e-2}} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=4}} | ||
Revision as of 15:22, 5 January 2021
Contents
Gene SJ11469
- transcription-direction:
- positive
- right-end-position:
- 1271
- left-end-position:
- 56
- centisome-position:
- 1.506777700e-2
Organism(s) associated with this gene
Reaction(s) associated
- BTUR2-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- COBALADENOSYLTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- R344-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- COBALSYN-PWY
- 1 reactions found over 5 reactions in the full pathway
- PWY-6269
- 1 reactions found over 6 reactions in the full pathway
- PWY-6268
- 1 reactions found over 5 reactions in the full pathway
- PWY-7962
- 1 reactions found over 6 reactions in the full pathway
