Difference between revisions of "SJ00005"

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(Created page with "Category:gene == Gene SJ11469 == * transcription-direction: ** positive * right-end-position: ** 1271 * left-end-position: ** 56 * centisome-position: ** 1.506777700e-2 ==...")
(Created page with "Category:gene == Gene SJ12963 == * transcription-direction: ** negative * right-end-position: ** 250407 * left-end-position: ** 237577 * centisome-position: ** 68.185585...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ11469 ==
+
== Gene SJ12963 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 1271
+
** 250407
 
* left-end-position:
 
* left-end-position:
** 56
+
** 237577
 
* centisome-position:
 
* centisome-position:
** 1.506777700e-2
+
** 68.185585   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[BTUR2-RXN]]
+
* [[2.7.11.2-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[2.7.11.4-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[COBALADENOSYLTRANS-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=250407}}
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=237577}}
* [[R344-RXN]]
+
{{#set: centisome-position=68.185585    }}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[COBALSYN-PWY]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6269]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6268]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7962]]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=1271}}
 
{{#set: left-end-position=56}}
 
{{#set: centisome-position=1.506777700e-2}}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=4}}
 

Revision as of 18:50, 14 January 2021

Gene SJ12963

  • transcription-direction:
    • negative
  • right-end-position:
    • 250407
  • left-end-position:
    • 237577
  • centisome-position:
    • 68.185585

Organism(s) associated with this gene

Reaction(s) associated