Difference between revisions of "SJ00010"

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(Created page with "Category:gene == Gene SJ04451 == * transcription-direction: ** negative * right-end-position: ** 100679 * left-end-position: ** 80548 * centisome-position: ** 15.767323...")
(Created page with "Category:gene == Gene SJ00010 == * transcription-direction: ** positive * right-end-position: ** 235660 * left-end-position: ** 232895 * centisome-position: ** 15.853389...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04451 ==
+
== Gene SJ00010 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 100679
+
** 235660
 
* left-end-position:
 
* left-end-position:
−
** 80548
+
** 232895
 
* centisome-position:
 
* centisome-position:
−
** 15.767323    
+
** 15.853389    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NICOTINATEPRIBOSYLTRANS-RXN]]
+
* [[3.4.25.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=235660}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=232895}}
−
* [[QUINOPRIBOTRANS-RXN]]
+
{{#set: centisome-position=15.853389   }}
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PYRIDNUCSAL-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5381]]
 
−
** '''6''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5653]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PYRIDNUCSYN-PWY]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7342]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5316]]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=100679}}
 
−
{{#set: left-end-position=80548}}
 
−
{{#set: centisome-position=15.767323   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:05, 18 March 2021

Gene SJ00010

  • transcription-direction:
    • positive
  • right-end-position:
    • 235660
  • left-end-position:
    • 232895
  • centisome-position:
    • 15.853389

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00010&oldid=133911"