Difference between revisions of "SJ00045"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ03985 == * transcription-direction: ** negative * right-end-position: ** 84816 * left-end-position: ** 84280 * centisome-position: ** 74.00838...")
(Created page with "Category:gene == Gene SJ11912 == * transcription-direction: ** negative * right-end-position: ** 374061 * left-end-position: ** 366557 * centisome-position: ** 47.40086...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03985 ==
+
== Gene SJ11912 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 84816
+
** 374061
 
* left-end-position:
 
* left-end-position:
−
** 84280
+
** 366557
 
* centisome-position:
 
* centisome-position:
−
** 74.00838    
+
** 47.40086    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[6PGLUCONDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-3341]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9952]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[P122-PWY]]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[RUMP-PWY]]
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[OXIDATIVEPENT-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=84816}}
+
{{#set: right-end-position=374061}}
−
{{#set: left-end-position=84280}}
+
{{#set: left-end-position=366557}}
−
{{#set: centisome-position=74.00838   }}
+
{{#set: centisome-position=47.40086   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=3}}

Revision as of 18:42, 14 January 2021

Gene SJ11912

  • transcription-direction:
    • negative
  • right-end-position:
    • 374061
  • left-end-position:
    • 366557
  • centisome-position:
    • 47.40086

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • RUMP-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00045&oldid=92653"