Difference between revisions of "SJ00098"

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(Created page with "Category:gene == Gene SJ06889 == * transcription-direction: ** positive * right-end-position: ** 456508 * left-end-position: ** 418983 * centisome-position: ** 89.40917...")
(Created page with "Category:gene == Gene SJ06882 == * transcription-direction: ** positive * right-end-position: ** 362793 * left-end-position: ** 349863 * centisome-position: ** 74.659256...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06889 ==
+
== Gene SJ06882 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 456508
+
** 362793
 
* left-end-position:
 
* left-end-position:
−
** 418983
+
** 349863
 
* centisome-position:
 
* centisome-position:
−
** 89.40917    
+
** 74.659256    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15559]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11750]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12969]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13001]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13302]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13303]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13304]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13305]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13444]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14485]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14494]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16021]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15560]]
+
* [[RXN-16096]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[RXN-16113]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-16130]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16155]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17110]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-5080]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7592]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5353]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7724]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7619]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7602]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7036]]
 +
** '''14''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-7053]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7606]]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7727]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6433]]
 +
** '''17''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-7049]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6958]]
 +
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7725]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6598]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7601]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7726]]
 +
** '''8''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-7728]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=456508}}
+
{{#set: right-end-position=362793}}
−
{{#set: left-end-position=418983}}
+
{{#set: left-end-position=349863}}
−
{{#set: centisome-position=89.40917   }}
+
{{#set: centisome-position=74.659256   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=17}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=18}}

Revision as of 11:05, 15 January 2021

Gene SJ06882

  • transcription-direction:
    • positive
  • right-end-position:
    • 362793
  • left-end-position:
    • 349863
  • centisome-position:
    • 74.659256

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5080
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7592
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5353
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7724
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7619
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7602
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7036
    • 14 reactions found over 16 reactions in the full pathway
  • PWY-7053
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7606
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-7727
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-6433
    • 17 reactions found over 22 reactions in the full pathway
  • PWY-7049
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-6958
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-7725
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-6598
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7601
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7726
    • 8 reactions found over 13 reactions in the full pathway
  • PWY-7728
    • 2 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00098&oldid=107313"