Difference between revisions of "SJ00100"

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(Created page with "Category:gene == Gene SJ03139 == * transcription-direction: ** negative * right-end-position: ** 359954 * left-end-position: ** 342918 * centisome-position: ** 64.716896...")
(Created page with "Category:gene == Gene SJ09343 == * transcription-direction: ** positive * right-end-position: ** 26770 * left-end-position: ** 14204 * centisome-position: ** 34.123726...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ03139 ==
+
== Gene SJ09343 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 359954
+
** 26770
 
* left-end-position:
 
* left-end-position:
** 342918
+
** 14204
 
* centisome-position:
 
* centisome-position:
** 64.716896    
+
** 34.123726    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[TRIMETHYLLYSINE-DIOXYGENASE-RXN]]
* [[3.2.1.23-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[BETAGALACTOSID-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[KETOLACTOSE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12398]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12399]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-12400]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[BGALACT-PWY]]
+
* [[PWY-6100]]
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
* [[LACTOSEUTIL-PWY]]
+
{{#set: transcription-direction=positive}}
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=26770}}
* [[PWY-6807]]
+
{{#set: left-end-position=14204}}
** '''3''' reactions found over '''8''' reactions in the full pathway
+
{{#set: centisome-position=34.123726   }}
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=359954}}
 
{{#set: left-end-position=342918}}
 
{{#set: centisome-position=64.716896   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Revision as of 08:23, 15 March 2021

Gene SJ09343

  • transcription-direction:
    • positive
  • right-end-position:
    • 26770
  • left-end-position:
    • 14204
  • centisome-position:
    • 34.123726

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6100
    • 3 reactions found over 4 reactions in the full pathway