Difference between revisions of "SJ00103"

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(Created page with "Category:gene == Gene SJ12311 == * transcription-direction: ** positive * right-end-position: ** 71323 * left-end-position: ** 62936 * centisome-position: ** 17.47863...")
 
(Created page with "Category:gene == Gene SJ04782 == * transcription-direction: ** negative * right-end-position: ** 213969 * left-end-position: ** 209773 * centisome-position: ** 41.513233...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12311 ==
+
== Gene SJ04782 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 71323
+
** 213969
 
* left-end-position:
 
* left-end-position:
−
** 62936
+
** 209773
 
* centisome-position:
 
* centisome-position:
−
** 17.47863    
+
** 41.513233    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBODEHYDRAT-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.1.1.145-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-5224]]
+
* [[1.1.1.170-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12693]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12747]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12789]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13926]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-18]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-23]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-313]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-318]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-342]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-350]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-353]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6142]]
+
* [[PWY-6946]]
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''22''' reactions in the full pathway
−
* [[PWY-7115]]
+
* [[PWY-6944]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''25''' reactions in the full pathway
−
* [[PWYQT-4429]]
+
* [[PWY-6948]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''18''' reactions in the full pathway
−
* [[CYANCAT-PWY]]
+
* [[PWY66-3]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''12''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-5744]]
+
* [[PWY-6074]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-5789]]
+
* [[PWY66-4]]
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''14''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7117]]
+
* [[PWY66-341]]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''14''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-5743]]
+
* [[PWY66-378]]
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-241]]
+
* [[PWY-7299]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=71323}}
+
{{#set: right-end-position=213969}}
−
{{#set: left-end-position=62936}}
+
{{#set: left-end-position=209773}}
−
{{#set: centisome-position=17.47863   }}
+
{{#set: centisome-position=41.513233   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=13}}
 
{{#set: nb pathway associated=9}}
 
{{#set: nb pathway associated=9}}

Revision as of 14:21, 26 August 2019

Gene SJ04782

  • transcription-direction:
    • negative
  • right-end-position:
    • 213969
  • left-end-position:
    • 209773
  • centisome-position:
    • 41.513233

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY66-3
    • 12 reactions found over 18 reactions in the full pathway
  • PWY-6074
    • 6 reactions found over 14 reactions in the full pathway
  • PWY66-4
    • 14 reactions found over 4 reactions in the full pathway
  • PWY66-341
    • 14 reactions found over 18 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway




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