Difference between revisions of "SJ00157"
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(Created page with "Category:gene == Gene SJ15896 == * transcription-direction: ** negative * right-end-position: ** 206964 * left-end-position: ** 191074 * centisome-position: ** 65.81837...") |
(Created page with "Category:gene == Gene SJ05275 == * transcription-direction: ** negative * right-end-position: ** 61388 * left-end-position: ** 60483 * centisome-position: ** 63.97271...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ05275 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 61388 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 60483 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 63.97271 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[HBNOm]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RETINOL-DEHYDROGENASE-RXN]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | * [[RXN- | + | * [[RXN-12581]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-17728]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY66-368]] |
| − | ** '''2''' reactions found over '''4''' reactions in the full pathway | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY66-367]] |
| − | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY66-380]] |
| − | ** ''' | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
| + | * [[PWY-6872]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7782]] | ||
| + | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=61388}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=60483}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=63.97271 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 14:22, 26 August 2019
Contents
Gene SJ05275
- transcription-direction:
- negative
- right-end-position:
- 61388
- left-end-position:
- 60483
- centisome-position:
- 63.97271
Organism(s) associated with this gene
Reaction(s) associated
- 3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- ESTRADIOL-17-BETA-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- HBNOm
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RETINOL-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12581
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-17728
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY66-368
- 2 reactions found over 3 reactions in the full pathway
- PWY66-367
- 4 reactions found over 5 reactions in the full pathway
- PWY66-380
- 1 reactions found over 4 reactions in the full pathway
- PWY-6872
- 1 reactions found over 4 reactions in the full pathway
- PWY-7782
- 11 reactions found over 16 reactions in the full pathway
