Difference between revisions of "SJ00157"
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(Created page with "Category:gene == Gene SJ19056 == * transcription-direction: ** negative * right-end-position: ** 137446 * left-end-position: ** 122868 * centisome-position: ** 52.91496...") |
(Created page with "Category:gene == Gene SJ01760 == * transcription-direction: ** negative * right-end-position: ** 112752 * left-end-position: ** 79045 * centisome-position: ** 14.416615...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ01760 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 112752 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 79045 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 14.416615 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_carotenoid_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN- | + | * [[ARPT]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[FADSYN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RIBOFLAVINKIN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-5187]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY66-366]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY- | + | * [[RIBOSYN2-PWY]] |
| − | ** ''' | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
| + | * [[PWY-6167]] | ||
| + | ** '''5''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-6168]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7863]] | ||
| + | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-5523]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=112752}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=79045}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=14.416615 }} |
| − | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_carotenoid_curated}} |
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 14:50, 5 January 2021
Contents
Gene SJ01760
- transcription-direction:
- negative
- right-end-position:
- 112752
- left-end-position:
- 79045
- centisome-position:
- 14.416615
Organism(s) associated with this gene
Reaction(s) associated
- ARPT
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- FADSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- RIBOFLAVINKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5187
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY66-366
- 2 reactions found over 2 reactions in the full pathway
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-6167
- 5 reactions found over 10 reactions in the full pathway
- PWY-6168
- 7 reactions found over 9 reactions in the full pathway
- PWY-7863
- 1 reactions found over 7 reactions in the full pathway
- PWY-5523
- 1 reactions found over 3 reactions in the full pathway
