Difference between revisions of "SJ00209"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ10725 == * transcription-direction: ** positive * right-end-position: ** 20834 * left-end-position: ** 12067 * centisome-position: ** 44.146484...")
(Created page with "Category:gene == Gene SJ10245 == * transcription-direction: ** positive * right-end-position: ** 82289 * left-end-position: ** 65643 * centisome-position: ** 16.648659...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10725 ==
+
== Gene SJ10245 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 20834
+
** 82289
 
* left-end-position:
 
* left-end-position:
−
** 12067
+
** 65643
 
* centisome-position:
 
* centisome-position:
−
** 44.146484    
+
** 16.648659    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DIHYDLIPACETRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ACETOLACTREDUCTOISOM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PYRUVDEH-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-1133]]
+
* [[ACETOOHBUTREDUCTOISOM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[KARI_LPAREN_23dhmb_RPAREN_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[KARI_LPAREN_23dhmp_RPAREN_]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14106]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
+
* [[VALSYN-PWY]]
−
** '''3''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7218]]
+
* [[PWY-7111]]
−
** '''7''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5482]]
+
* [[ILEUSYN-PWY]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5537]]
+
* [[PWY-5103]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6886]]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7384]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PYRUVDEHYD-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=20834}}
+
{{#set: right-end-position=82289}}
−
{{#set: left-end-position=12067}}
+
{{#set: left-end-position=65643}}
−
{{#set: centisome-position=44.146484   }}
+
{{#set: centisome-position=16.648659   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:18, 15 March 2021

Gene SJ10245

  • transcription-direction:
    • positive
  • right-end-position:
    • 82289
  • left-end-position:
    • 65643
  • centisome-position:
    • 16.648659

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • VALSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7111
    • 4 reactions found over 5 reactions in the full pathway
  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5103
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00209&oldid=121133"