Difference between revisions of "SJ00231"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-3-METHYL-VALERATE 2-KETO-3-METHYL-VALERATE] == * common-name: ** (s)-3-methyl-2-oxopenta...")
 
(Created page with "Category:gene == Gene SJ00231 == * transcription-direction: ** negative * right-end-position: ** 103812 * left-end-position: ** 89822 * centisome-position: ** 15.766377...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=2-KETO-3-METHYL-VALERATE 2-KETO-3-METHYL-VALERATE] ==
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== Gene SJ00231 ==
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* common-name:
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* transcription-direction:
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** (s)-3-methyl-2-oxopentanoate
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** negative
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* smiles:
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* right-end-position:
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** ccc(c)c(=o)c([o-])=o
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** 103812
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* inchi-key:
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* left-end-position:
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** jvqyswduaoahfm-bypyzucnsa-m
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** 89822
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* molecular-weight:
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* centisome-position:
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** 129.135
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** 15.766377   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[2KETO-3METHYLVALERATE-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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== Reaction(s) associated ==
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* [[METHYLVALERATE-RXN]]
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* [[DTDPGLUCDEHYDRAT-RXN]]
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[2KETO-3METHYLVALERATE-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
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* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
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** Category: [[annotation]]
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* [[METHYLVALERATE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=(s)-3-methyl-2-oxopentanoate}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=jvqyswduaoahfm-bypyzucnsa-m}}
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* [[UGDC]]
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{{#set: molecular-weight=129.135}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6808]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7657]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7104]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6973]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6974]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6976]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6953]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7414]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7315]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7318]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6942]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7440]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7814]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-3221]]
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** '''1''' reactions found over '''n.a''' reactions in the full pathway
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* [[PWY-7413]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7312]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7316]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[DTDPRHAMSYN-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7688]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7301]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-4821]]
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** '''2''' reactions found over '''1''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=103812}}
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{{#set: left-end-position=89822}}
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{{#set: centisome-position=15.766377    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=21}}

Latest revision as of 11:03, 18 March 2021

Gene SJ00231

  • transcription-direction:
    • negative
  • right-end-position:
    • 103812
  • left-end-position:
    • 89822
  • centisome-position:
    • 15.766377

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6808
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7657
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7104
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6973
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-6974
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6976
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6953
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7414
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7315
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7318
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6942
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7440
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7814
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-3221
    • 1 reactions found over n.a reactions in the full pathway
  • PWY-7413
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7312
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7316
    • 1 reactions found over 4 reactions in the full pathway
  • DTDPRHAMSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7688
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7301
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-4821
    • 2 reactions found over 1 reactions in the full pathway




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