Difference between revisions of "SJ00239"

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(Created page with "Category:gene == Gene SJ04581 == * transcription-direction: ** negative * right-end-position: ** 27433 * left-end-position: ** 17611 * centisome-position: ** 16.771263...")
(Created page with "Category:gene == Gene SJ00239 == * transcription-direction: ** positive * right-end-position: ** 115533 * left-end-position: ** 92580 * centisome-position: ** 54.38684...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04581 ==
+
== Gene SJ00239 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 27433
+
** 115533
 
* left-end-position:
 
* left-end-position:
** 17611
+
** 92580
 
* centisome-position:
 
* centisome-position:
** 16.771263    
+
** 54.38684    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.3.7.3-RXN]]
+
* [[2.3.1.97-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[1.3.7.4-RXN]]
+
{{#set: transcription-direction=positive}}
** Category: [[annotation]]
+
{{#set: right-end-position=115533}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=92580}}
** Category: [[orthology]]
+
{{#set: centisome-position=54.38684   }}
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[R05819]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[PWY-5915]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7579]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7170]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=27433}}
 
{{#set: left-end-position=17611}}
 
{{#set: centisome-position=16.771263   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=3}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ00239

  • transcription-direction:
    • positive
  • right-end-position:
    • 115533
  • left-end-position:
    • 92580
  • centisome-position:
    • 54.38684

Organism(s) associated with this gene

Reaction(s) associated