Difference between revisions of "SJ00266"
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(Created page with "Category:gene == Gene SJ16078 == * transcription-direction: ** negative * right-end-position: ** 20311 * left-end-position: ** 11460 * centisome-position: ** 3.9779649...") |
(Created page with "Category:gene == Gene SJ10598 == * transcription-direction: ** positive * right-end-position: ** 337627 * left-end-position: ** 334468 * centisome-position: ** 86.17733...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10598 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 337627 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 334468 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 86.17733 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[ADCPT]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[DEPHOSPHOCOAKIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[PANTEPADENYLYLTRAN-RXN]] |
| − | * [[RXN | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[COA-PWY]] |
| − | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7851]] |
| − | {{#set: right-end-position= | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=337627}} |
| + | {{#set: left-end-position=334468}} | ||
| + | {{#set: centisome-position=86.17733 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Revision as of 15:23, 5 January 2021
Contents
Gene SJ10598
- transcription-direction:
- positive
- right-end-position:
- 337627
- left-end-position:
- 334468
- centisome-position:
- 86.17733
Organism(s) associated with this gene
Reaction(s) associated
- ADCPT
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- DEPHOSPHOCOAKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PANTEPADENYLYLTRAN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- COA-PWY
- 4 reactions found over 4 reactions in the full pathway
- PWY-7851
- 3 reactions found over 4 reactions in the full pathway
