Difference between revisions of "SJ00292"

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(Created page with "Category:gene == Gene SJ04717 == * transcription-direction: ** positive * right-end-position: ** 133911 * left-end-position: ** 126274 * centisome-position: ** 24.949419...")
(Created page with "Category:gene == Gene SJ00292 == * transcription-direction: ** positive * right-end-position: ** 105365 * left-end-position: ** 90444 * centisome-position: ** 53.45832...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04717 ==
+
== Gene SJ00292 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 133911
+
** 105365
 
* left-end-position:
 
* left-end-position:
−
** 126274
+
** 90444
 
* centisome-position:
 
* centisome-position:
−
** 24.949419    
+
** 53.45832    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2-ISOPROPYLMALATESYN-RXN]]
+
* [[2.7.1.68-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[IPMS]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[LEUSYN-PWY]]
+
* [[PWY-6352]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6871]]
+
* [[PWY-6351]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=133911}}
+
{{#set: right-end-position=105365}}
−
{{#set: left-end-position=126274}}
+
{{#set: left-end-position=90444}}
−
{{#set: centisome-position=24.949419   }}
+
{{#set: centisome-position=53.45832   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}

Latest revision as of 11:08, 18 March 2021

Gene SJ00292

  • transcription-direction:
    • positive
  • right-end-position:
    • 105365
  • left-end-position:
    • 90444
  • centisome-position:
    • 53.45832

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6352
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-6351
    • 4 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00292&oldid=135146"