Difference between revisions of "SJ00320"

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(Created page with "Category:gene == Gene SJ04057 == * transcription-direction: ** positive * right-end-position: ** 290761 * left-end-position: ** 286134 * centisome-position: ** 55.21179...")
(Created page with "Category:gene == Gene SJ05932 == * transcription-direction: ** negative * right-end-position: ** 68527 * left-end-position: ** 64960 * centisome-position: ** 75.25137...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04057 ==
+
== Gene SJ05932 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 290761
+
** 68527
 
* left-end-position:
 
* left-end-position:
−
** 286134
+
** 64960
 
* centisome-position:
 
* centisome-position:
−
** 55.21179    
+
** 75.25137    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
+
* [[2.7.8.23-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[ISOCIT-CLEAV-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
{{#set: transcription-direction=positive}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: right-end-position=290761}}
+
* [[RXN-10827]]
−
{{#set: left-end-position=286134}}
+
** Category: [[annotation]]
−
{{#set: centisome-position=55.21179   }}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10828]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[P105-PWY]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[GLYOXYLATE-BYPASS]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7769]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-6322]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=68527}}
 +
{{#set: left-end-position=64960}}
 +
{{#set: centisome-position=75.25137   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=5}}

Revision as of 18:50, 14 January 2021

Gene SJ05932

  • transcription-direction:
    • negative
  • right-end-position:
    • 68527
  • left-end-position:
    • 64960
  • centisome-position:
    • 75.25137

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P105-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 12 reactions in the full pathway
  • GLYOXYLATE-BYPASS
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7769
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6322
    • 2 reactions found over 25 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00320&oldid=96432"