Difference between revisions of "SJ00390"

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(Created page with "Category:gene == Gene SJ12221 == * transcription-direction: ** negative * right-end-position: ** 72190 * left-end-position: ** 63149 * centisome-position: ** 8.255872...")
(Created page with "Category:gene == Gene SJ20564 == * transcription-direction: ** positive * right-end-position: ** 33331 * left-end-position: ** 25978 * centisome-position: ** 12.61368...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12221 ==
+
== Gene SJ20564 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 72190
+
** 33331
 
* left-end-position:
 
* left-end-position:
** 63149
+
** 25978
 
* centisome-position:
 
* centisome-position:
** 8.255872    
+
** 12.61368    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[XYLULOKIN-RXN]]
+
* [[RXN-12502]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Pathway(s) associated ==
+
* [[RXN-12503]]
* [[DARABITOLUTIL-PWY]]
+
** Category: [[annotation]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[LARABITOLUTIL-PWY]]
+
** Category: [[orthology]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[XYLCAT-PWY]]
+
* [[RXN-12504]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** Category: [[annotation]]
{{#set: transcription-direction=negative}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: right-end-position=72190}}
+
** Category: [[orthology]]
{{#set: left-end-position=63149}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: centisome-position=8.255872   }}
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=33331}}
 +
{{#set: left-end-position=25978}}
 +
{{#set: centisome-position=12.61368   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=3}}
 

Revision as of 15:20, 5 January 2021

Gene SJ20564

  • transcription-direction:
    • positive
  • right-end-position:
    • 33331
  • left-end-position:
    • 25978
  • centisome-position:
    • 12.61368

Organism(s) associated with this gene

Reaction(s) associated