Difference between revisions of "SJ00411"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHOXY-BENZOQUINONE OCTAPRENYL-METHOXY-BENZOQUINONE] == * common-name: ** 2-methoxy...")
(Created page with "Category:gene == Gene SJ00411 == * transcription-direction: ** positive * right-end-position: ** 565924 * left-end-position: ** 560840 * centisome-position: ** 98.76343...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-METHOXY-BENZOQUINONE OCTAPRENYL-METHOXY-BENZOQUINONE] ==
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== Gene SJ00411 ==
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* common-name:
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* transcription-direction:
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** 2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol
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** positive
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* smiles:
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* right-end-position:
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** cc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=cccc(=ccc1(c(=c(oc)c=c(c=1)o)o))c)c)c)c)c)c)c)c
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** 565924
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* inchi-key:
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* left-end-position:
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** czfrmaseeptbaq-mycgwmctsa-n
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** 560840
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* molecular-weight:
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* centisome-position:
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** 685.084
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** 98.76343   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[RIB5PISOM-RXN]]
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{{#set: common-name=2-methoxy-6-all trans-octaprenyl-1,4-benzoquinol}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=czfrmaseeptbaq-mycgwmctsa-n}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=685.084}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[P124-PWY]]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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* [[P185-PWY]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[NONOXIPENT-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5723]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[CALVIN-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-1861]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=565924}}
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{{#set: left-end-position=560840}}
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{{#set: centisome-position=98.76343    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:03, 18 March 2021

Gene SJ00411

  • transcription-direction:
    • positive
  • right-end-position:
    • 565924
  • left-end-position:
    • 560840
  • centisome-position:
    • 98.76343

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00411&oldid=132966"