Difference between revisions of "SJ00475"
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(Created page with "Category:gene == Gene SJ10676 == * transcription-direction: ** negative * right-end-position: ** 405704 * left-end-position: ** 391781 * centisome-position: ** 49.711967...") |
(Created page with "Category:gene == Gene SJ13198 == * transcription-direction: ** negative * right-end-position: ** 228190 * left-end-position: ** 215058 * centisome-position: ** 62.38592...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13198 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 228190 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 215058 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 62.38592 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[ORDC]] | |
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[ORNDECARBOX-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-46]] |
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-6305]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[ORNDEG-PWY]] | ||
** '''1''' reactions found over '''2''' reactions in the full pathway | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| − | |||
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{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=228190}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=215058}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=62.38592 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 09:26, 27 August 2019
Contents
Gene SJ13198
- transcription-direction:
- negative
- right-end-position:
- 228190
- left-end-position:
- 215058
- centisome-position:
- 62.38592
Organism(s) associated with this gene
Reaction(s) associated
- ORDC
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- ORNDECARBOX-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-46
- 1 reactions found over 1 reactions in the full pathway
- PWY-6305
- 4 reactions found over 4 reactions in the full pathway
- ORNDEG-PWY
- 1 reactions found over 2 reactions in the full pathway
