Difference between revisions of "SJ00475"

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(Created page with "Category:gene == Gene SJ06607 == * transcription-direction: ** positive * right-end-position: ** 332983 * left-end-position: ** 292787 * centisome-position: ** 61.98584...")
(Created page with "Category:gene == Gene SJ02923 == * transcription-direction: ** positive * right-end-position: ** 510784 * left-end-position: ** 495267 * centisome-position: ** 93.25499...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06607 ==
+
== Gene SJ02923 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 332983
+
** 510784
 
* left-end-position:
 
* left-end-position:
−
** 292787
+
** 495267
 
* centisome-position:
 
* centisome-position:
−
** 61.98584    
+
** 93.25499    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[G5DH]]
−
* [[2.7.1.152-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[G5DHm]]
−
* [[2.7.4.24-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[GLUTKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ACID-PHOSPHATASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10971]]
+
* [[GLUTSEMIALDEHYDROG-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10972]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10973]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10974]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10979]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-5822]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6369]]
+
* [[PWY-6922]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6348]]
+
* [[ARGININE-SYN4-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[NAD-BIOSYNTHESIS-II]]
+
* [[PWY-3341]]
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
** '''4''' reactions found over '''3''' reactions in the full pathway
−
* [[NADPHOS-DEPHOS-PWY]]
+
* [[PROSYN-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5083]]
+
* [[CITRULBIO-PWY]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=332983}}
+
{{#set: right-end-position=510784}}
−
{{#set: left-end-position=292787}}
+
{{#set: left-end-position=495267}}
−
{{#set: centisome-position=61.98584   }}
+
{{#set: centisome-position=93.25499   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=4}}
 
{{#set: nb pathway associated=5}}
 
{{#set: nb pathway associated=5}}

Revision as of 14:50, 5 January 2021

Gene SJ02923

  • transcription-direction:
    • positive
  • right-end-position:
    • 510784
  • left-end-position:
    • 495267
  • centisome-position:
    • 93.25499

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6922
    • 5 reactions found over 7 reactions in the full pathway
  • ARGININE-SYN4-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00475&oldid=57155"