Difference between revisions of "SJ00484"

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(Created page with "Category:gene == Gene SJ09824 == * transcription-direction: ** negative * right-end-position: ** 28181 * left-end-position: ** 20602 * centisome-position: ** 56.77985...")
(Created page with "Category:gene == Gene SJ04089 == * transcription-direction: ** positive * right-end-position: ** 9125 * left-end-position: ** 3220 * centisome-position: ** 2.8717182 =...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ09824 ==
+
== Gene SJ04089 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 28181
+
** 9125
 
* left-end-position:
 
* left-end-position:
** 20602
+
** 3220
 
* centisome-position:
 
* centisome-position:
** 56.77985    
+
** 2.8717182    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.4.1.109-RXN]]
+
* [[MALONYL-COA-DECARBOXYLASE-RXN]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[2.4.1.83-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-16602]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
* [[PWY-7921]]
+
{{#set: right-end-position=9125}}
** '''2''' reactions found over '''7''' reactions in the full pathway
+
{{#set: left-end-position=3220}}
* [[PWY-7922]]
+
{{#set: centisome-position=2.8717182   }}
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
 
** '''16''' reactions found over '''19''' reactions in the full pathway
 
* [[PWY-7661]]
 
** '''1''' reactions found over '''11''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=28181}}
 
{{#set: left-end-position=20602}}
 
{{#set: centisome-position=56.77985   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
 

Revision as of 09:26, 27 August 2019

Gene SJ04089

  • transcription-direction:
    • positive
  • right-end-position:
    • 9125
  • left-end-position:
    • 3220
  • centisome-position:
    • 2.8717182

Organism(s) associated with this gene

Reaction(s) associated