Difference between revisions of "SJ00542"

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(Created page with "Category:gene == Gene SJ04340 == * transcription-direction: ** negative * right-end-position: ** 759076 * left-end-position: ** 752839 * centisome-position: ** 77.359375...")
(Created page with "Category:gene == Gene SJ00580 == * transcription-direction: ** positive * right-end-position: ** 126885 * left-end-position: ** 113039 * centisome-position: ** 68.4214...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04340 ==
+
== Gene SJ00580 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 759076
+
** 126885
 
* left-end-position:
 
* left-end-position:
** 752839
+
** 113039
 
* centisome-position:
 
* centisome-position:
** 77.359375    
+
** 68.4214    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.3.7.2-RXN]]
+
* [[RXN-11841]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[R05818]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
* [[PWY-5915]]
+
{{#set: right-end-position=126885}}
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=113039}}
* [[PWY-7579]]
+
{{#set: centisome-position=68.4214   }}
** '''3''' reactions found over '''5''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=759076}}
 
{{#set: left-end-position=752839}}
 
{{#set: centisome-position=77.359375   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
 

Revision as of 11:03, 15 January 2021

Gene SJ00580

  • transcription-direction:
    • positive
  • right-end-position:
    • 126885
  • left-end-position:
    • 113039
  • centisome-position:
    • 68.4214

Organism(s) associated with this gene

Reaction(s) associated