Difference between revisions of "SJ00560"

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(Created page with "Category:gene == Gene SJ00670 == * transcription-direction: ** negative * right-end-position: ** 161545 * left-end-position: ** 157778 * centisome-position: ** 96.32591...")
(Created page with "Category:gene == Gene SJ10244 == * transcription-direction: ** positive * right-end-position: ** 62596 * left-end-position: ** 33464 * centisome-position: ** 8.487284...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00670 ==
+
== Gene SJ10244 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 161545
+
** 62596
 
* left-end-position:
 
* left-end-position:
−
** 157778
+
** 33464
 
* centisome-position:
 
* centisome-position:
−
** 96.32591    
+
** 8.487284    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-11586]]
+
* [[3.4.11.2-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=161545}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=157778}}
+
* [[RXN-13677]]
−
{{#set: centisome-position=96.32591   }}
+
** Category: [[annotation]]
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: nb reaction associated=1}}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-6642]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7112]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6842]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4061]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=62596}}
 +
{{#set: left-end-position=33464}}
 +
{{#set: centisome-position=8.487284   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=3}}

Revision as of 20:23, 18 December 2020

Gene SJ10244

  • transcription-direction:
    • positive
  • right-end-position:
    • 62596
  • left-end-position:
    • 33464
  • centisome-position:
    • 8.487284

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7112
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway




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