Difference between revisions of "SJ00579"
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(Created page with "Category:gene == Gene SJ01632 == * transcription-direction: ** negative * right-end-position: ** 129728 * left-end-position: ** 127099 * centisome-position: ** 86.40019...") |
(Created page with "Category:gene == Gene SJ00579 == * transcription-direction: ** positive * right-end-position: ** 108541 * left-end-position: ** 100562 * centisome-position: ** 60.869198...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ00579 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 108541 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 100562 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 60.869198 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[SMO]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | * [[SQUALENE-MONOOXYGENASE-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6098]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5670]] |
| − | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | + | {{#set: transcription-direction=positive}} | |
| − | + | {{#set: right-end-position=108541}} | |
| − | + | {{#set: left-end-position=100562}} | |
| − | + | {{#set: centisome-position=60.869198 }} | |
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Latest revision as of 11:09, 18 March 2021
Contents
Gene SJ00579
- transcription-direction:
- positive
- right-end-position:
- 108541
- left-end-position:
- 100562
- centisome-position:
- 60.869198
Organism(s) associated with this gene
Reaction(s) associated
- SMO
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- SQUALENE-MONOOXYGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6098
- 2 reactions found over 2 reactions in the full pathway
- PWY-5670
- 2 reactions found over 3 reactions in the full pathway
