Difference between revisions of "SJ00586"
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(Created page with "Category:gene == Gene SJ12566 == * transcription-direction: ** positive * right-end-position: ** 242405 * left-end-position: ** 234314 * centisome-position: ** 65.50830...") |
(Created page with "Category:gene == Gene SJ01024 == * transcription-direction: ** negative * right-end-position: ** 239269 * left-end-position: ** 233634 * centisome-position: ** 42.04894...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ01024 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 239269 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 233634 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 42.04894 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.1.1.34-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[RXN-11866]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RXN-11868]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-2542]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-6829]] | ||
| + | ** '''11''' reactions found over '''15''' reactions in the full pathway | ||
| + | * [[PWY-1422]] | ||
| + | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=239269}} | ||
| + | {{#set: left-end-position=233634}} | ||
| + | {{#set: centisome-position=42.04894 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=2}} | ||
Revision as of 11:07, 15 January 2021
Contents
Gene SJ01024
- transcription-direction:
- negative
- right-end-position:
- 239269
- left-end-position:
- 233634
- centisome-position:
- 42.04894
Organism(s) associated with this gene
Reaction(s) associated
- 2.1.1.34-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11866
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11868
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-2542
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-6829
- 11 reactions found over 15 reactions in the full pathway
- PWY-1422
- 5 reactions found over 7 reactions in the full pathway
