Difference between revisions of "SJ00619"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14282 CPD-14282] == * common-name: ** trans-lignocer-2-enoyl-coa * smiles: ** ccccccccccccc...")
 
(Created page with "Category:gene == Gene SJ00619 == * transcription-direction: ** positive * right-end-position: ** 521392 * left-end-position: ** 515275 * centisome-position: ** 91.12025...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14282 CPD-14282] ==
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== Gene SJ00619 ==
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* common-name:
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* transcription-direction:
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** trans-lignocer-2-enoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cccccccccccccccccccccc=cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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** 521392
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* inchi-key:
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* left-end-position:
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** uvjkzcsqlmwpmv-lqjawxtisa-j
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** 515275
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* molecular-weight:
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* centisome-position:
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** 1112.113
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** 91.12025   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13308]]
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* [[S.japonica_carotenoid_curated]]
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* [[TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10280/NAD//CPD-14282/NADH/PROTON.37.]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[RXN-16820]]
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* [[RXN-13304]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=trans-lignocer-2-enoyl-coa}}
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* [[RXN-16821]]
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{{#set: inchi-key=inchikey=uvjkzcsqlmwpmv-lqjawxtisa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=1112.113}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-2023]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7889]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7892]]
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** '''3''' reactions found over '''11''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=521392}}
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{{#set: left-end-position=515275}}
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{{#set: centisome-position=91.12025    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=2}}

Latest revision as of 11:00, 18 March 2021

Gene SJ00619

  • transcription-direction:
    • positive
  • right-end-position:
    • 521392
  • left-end-position:
    • 515275
  • centisome-position:
    • 91.12025

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7889
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7892
    • 3 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00619&oldid=131757"