Difference between revisions of "SJ00634"

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(Created page with "Category:gene == Gene SJ16950 == * transcription-direction: ** negative * right-end-position: ** 521708 * left-end-position: ** 506485 * centisome-position: ** 74.264336...")
(Created page with "Category:gene == Gene SJ03188 == * transcription-direction: ** negative * right-end-position: ** 115636 * left-end-position: ** 99758 * centisome-position: ** 80.366394...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16950 ==
+
== Gene SJ03188 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 521708
+
** 115636
 
* left-end-position:
 
* left-end-position:
** 506485
+
** 99758
 
* centisome-position:
 
* centisome-position:
** 74.264336    
+
** 80.366394    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ASPARTATE--TRNA-LIGASE-RXN]]
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[F16BDEPHOS-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[SEDOHEPTULOSE-BISPHOSPHATASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[SUGAR-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[P185-PWY]]
+
* [[TRNA-CHARGING-PWY]]
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY66-399]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
* [[SUCSYN-PWY]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
* [[CALVIN-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[GLUCONEO-PWY]]
 
** '''12''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-5484]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[GLYCOLYSIS]]
 
** '''11''' reactions found over '''12''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=521708}}
+
{{#set: right-end-position=115636}}
{{#set: left-end-position=506485}}
+
{{#set: left-end-position=99758}}
{{#set: centisome-position=74.264336   }}
+
{{#set: centisome-position=80.366394   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}

Revision as of 13:02, 14 January 2021

Gene SJ03188

  • transcription-direction:
    • negative
  • right-end-position:
    • 115636
  • left-end-position:
    • 99758
  • centisome-position:
    • 80.366394

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated