Difference between revisions of "SJ00643"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=G5-pppR-mRNAs G5-pppR-mRNAs] == * common-name: ** a 5'-(5'-triphosphoguanosine)-purine-[mrna] =...") |
(Created page with "Category:gene == Gene SJ00643 == * transcription-direction: ** negative * right-end-position: ** 57312 * left-end-position: ** 39113 * centisome-position: ** 23.78847...") |
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| − | [[Category: | + | [[Category:gene]] |
| − | == | + | == Gene SJ00643 == |
| − | * | + | * transcription-direction: |
| − | ** | + | ** negative |
| − | == Reaction(s) | + | * right-end-position: |
| − | * [[ | + | ** 57312 |
| − | + | * left-end-position: | |
| − | * [[ | + | ** 39113 |
| − | == | + | * centisome-position: |
| − | {{#set: | + | ** 23.78847 |
| + | == Organism(s) associated with this gene == | ||
| + | * [[S.japonica_carotenoid_curated]] | ||
| + | == Reaction(s) associated == | ||
| + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
| + | * [[ATPASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-11135]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-12195]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-12196]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-5462]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | </div> | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7539]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-6797]] | ||
| + | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6147]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-6545]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7210]] | ||
| + | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-7198]] | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7184]] | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=57312}} | ||
| + | {{#set: left-end-position=39113}} | ||
| + | {{#set: centisome-position=23.78847 }} | ||
| + | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| + | {{#set: nb reaction associated=8}} | ||
| + | {{#set: nb pathway associated=7}} | ||
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ00643
- transcription-direction:
- negative
- right-end-position:
- 57312
- left-end-position:
- 39113
- centisome-position:
- 23.78847
Organism(s) associated with this gene
Reaction(s) associated
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11135
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-6797
- 3 reactions found over 7 reactions in the full pathway
- PWY-6147
- 5 reactions found over 5 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
