Difference between revisions of "SJ00667"

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(Created page with "Category:gene == Gene SJ21565 == * transcription-direction: ** positive * right-end-position: ** 409098 * left-end-position: ** 390894 * centisome-position: ** 65.67693...")
(Created page with "Category:gene == Gene SJ00667 == * transcription-direction: ** negative * right-end-position: ** 120197 * left-end-position: ** 114395 * centisome-position: ** 69.83993...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21565 ==
+
== Gene SJ00667 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 409098
+
** 120197
 
* left-end-position:
 
* left-end-position:
−
** 390894
+
** 114395
 
* centisome-position:
 
* centisome-position:
−
** 65.67693    
+
** 69.83993    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.3.16-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PHOSPHATIDYLCHOLINE-DESATURASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[RXN-8320]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-8322]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PHOSPHATIDYLINOSITOL-3-PHOSPHATASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]]
+
* [[RXN-8324]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10958]]
+
* [[RXN-8327]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8328]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8330]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8360]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9601]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9616]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9669]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6368]]
+
* [[PWY-762]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''19''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-6580]]
+
* [[PWY-6001]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6367]]
+
* [[PWY-5987]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5995]]
−
{{#set: right-end-position=409098}}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=390894}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=65.67693   }}
+
{{#set: right-end-position=120197}}
 +
{{#set: left-end-position=114395}}
 +
{{#set: centisome-position=69.83993   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:07, 18 March 2021

Gene SJ00667

  • transcription-direction:
    • negative
  • right-end-position:
    • 120197
  • left-end-position:
    • 114395
  • centisome-position:
    • 69.83993

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-762
    • 19 reactions found over 21 reactions in the full pathway
  • PWY-6001
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5987
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5995
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00667&oldid=135104"