Difference between revisions of "SJ00669"

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(Created page with "Category:gene == Gene SJ05258 == * transcription-direction: ** negative * right-end-position: ** 481707 * left-end-position: ** 469958 * centisome-position: ** 94.21734...")
(Created page with "Category:gene == Gene SJ14725 == * transcription-direction: ** positive * right-end-position: ** 131332 * left-end-position: ** 130400 * centisome-position: ** 41.996643...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05258 ==
+
== Gene SJ14725 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 481707
+
** 131332
 
* left-end-position:
 
* left-end-position:
−
** 469958
+
** 130400
 
* centisome-position:
 
* centisome-position:
−
** 94.21734    
+
** 41.996643    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[2.4.1.67-RXN]]
+
* [[1.1.1.197-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[1.1.1.270-RXN]]
−
* [[2.4.1.82-RXN]]
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[CARBONYL-REDUCTASE-NADPH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ALPHAGALACTOSID-RXN]]
+
* [[PROSTAGLANDIN-E2-9-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RIBITOL-2-DEHYDROGENASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-11501]]
+
* [[RXN-13686]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-19]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN66-24]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-11502]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12088]]
+
* [[RXN66-314]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN66-319]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17830]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5337]]
+
* [[RIBITOLUTIL-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6524]]
+
* [[PWY66-3]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''12''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-6525]]
+
* [[PWY66-4]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''14''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1301]]
+
* [[PWY-6074]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''6''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-6527]]
+
* [[PWY66-341]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''14''' reactions found over '''18''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=481707}}
+
{{#set: right-end-position=131332}}
−
{{#set: left-end-position=469958}}
+
{{#set: left-end-position=130400}}
−
{{#set: centisome-position=94.21734   }}
+
{{#set: centisome-position=41.996643   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=10}}
 
{{#set: nb pathway associated=5}}
 
{{#set: nb pathway associated=5}}

Revision as of 20:25, 18 December 2020

Gene SJ14725

  • transcription-direction:
    • positive
  • right-end-position:
    • 131332
  • left-end-position:
    • 130400
  • centisome-position:
    • 41.996643

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBITOLUTIL-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY66-3
    • 12 reactions found over 18 reactions in the full pathway
  • PWY66-4
    • 14 reactions found over 4 reactions in the full pathway
  • PWY-6074
    • 6 reactions found over 14 reactions in the full pathway
  • PWY66-341
    • 14 reactions found over 18 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00669&oldid=43706"