Difference between revisions of "SJ00718"

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(Created page with "Category:gene == Gene SJ06477 == * transcription-direction: ** negative * right-end-position: ** 133058 * left-end-position: ** 128055 * centisome-position: ** 26.930204...")
(Created page with "Category:gene == Gene SJ00718 == * transcription-direction: ** negative * right-end-position: ** 340652 * left-end-position: ** 334572 * centisome-position: ** 59.26002...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06477 ==
+
== Gene SJ00718 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 133058
+
** 340652
 
* left-end-position:
 
* left-end-position:
−
** 128055
+
** 334572
 
* centisome-position:
 
* centisome-position:
−
** 26.930204    
+
** 59.26002    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[SERINE-O-ACETTRAN-RXN]]
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ATPSYN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7219]]
+
* [[PWY-7870]]
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[PWY-7274]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[CYSTSYN-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6936]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=133058}}
+
{{#set: right-end-position=340652}}
−
{{#set: left-end-position=128055}}
+
{{#set: left-end-position=334572}}
−
{{#set: centisome-position=26.930204   }}
+
{{#set: centisome-position=59.26002   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:10, 18 March 2021

Gene SJ00718

  • transcription-direction:
    • negative
  • right-end-position:
    • 340652
  • left-end-position:
    • 334572
  • centisome-position:
    • 59.26002

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7870
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7274
    • 1 reactions found over 6 reactions in the full pathway
  • CYSTSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6936
    • 5 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00718&oldid=136206"