Difference between revisions of "SJ00719"

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(Created page with "Category:gene == Gene SJ13439 == * transcription-direction: ** positive * right-end-position: ** 242378 * left-end-position: ** 235563 * centisome-position: ** 32.331352...")
(Created page with "Category:gene == Gene SJ05358 == * transcription-direction: ** negative * right-end-position: ** 302934 * left-end-position: ** 294186 * centisome-position: ** 59.26199...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13439 ==
+
== Gene SJ05358 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 242378
+
** 302934
 
* left-end-position:
 
* left-end-position:
−
** 235563
+
** 294186
 
* centisome-position:
 
* centisome-position:
−
** 32.331352    
+
** 59.26199    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[HOMOSERDEAM-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
* [[LCYSDESULF-RXN]]
−
{{#set: right-end-position=242378}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=235563}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=32.331352   }}
+
* [[O-SUCCHOMOSERLYASE-RXN]]
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
** Category: [[annotation]]
−
{{#set: nb reaction associated=1}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14048]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14049]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15129]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15130]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY66-426]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-I9]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-801]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[HOMOCYSDEGR-PWY]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[LCYSDEG-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=302934}}
 +
{{#set: left-end-position=294186}}
 +
{{#set: centisome-position=59.26199   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=6}}

Revision as of 14:49, 5 January 2021

Gene SJ05358

  • transcription-direction:
    • negative
  • right-end-position:
    • 302934
  • left-end-position:
    • 294186
  • centisome-position:
    • 59.26199

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-426
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-I9
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-801
    • 3 reactions found over 4 reactions in the full pathway
  • HOMOSER-METSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • HOMOCYSDEGR-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • LCYSDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway




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