Difference between revisions of "SJ00773"

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(Created page with "Category:gene == Gene SJ04093 == * transcription-direction: ** positive * right-end-position: ** 45345 * left-end-position: ** 14767 * centisome-position: ** 13.174234...")
(Created page with "Category:gene == Gene SJ00773 == * transcription-direction: ** negative * right-end-position: ** 158139 * left-end-position: ** 145604 * centisome-position: ** 90.0491...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04093 ==
+
== Gene SJ00773 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 45345
+
** 158139
 
* left-end-position:
 
* left-end-position:
−
** 14767
+
** 145604
 
* centisome-position:
 
* centisome-position:
−
** 13.174234    
+
** 90.0491    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[AGMATIN-RXN]]
−
* [[PEROXID-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14240]]
+
* [[ARGINASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-8635]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY-6305]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY0-823]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-40]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY-6922]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5469]]
+
* [[PWY-4984]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5461]]
+
* [[ARG-GLU-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[ARG-PRO-PWY]]
−
{{#set: right-end-position=45345}}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=14767}}
+
* [[ARGASEDEG-PWY]]
−
{{#set: centisome-position=13.174234   }}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=158139}}
 +
{{#set: left-end-position=145604}}
 +
{{#set: centisome-position=90.0491   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:10, 18 March 2021

Gene SJ00773

  • transcription-direction:
    • negative
  • right-end-position:
    • 158139
  • left-end-position:
    • 145604
  • centisome-position:
    • 90.0491

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6305
    • 4 reactions found over n.a reactions in the full pathway
  • PWY0-823
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-40
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6922
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • ARG-GLU-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • ARGASEDEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway




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