Difference between revisions of "SJ00773"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ20370 == * transcription-direction: ** negative * right-end-position: ** 148342 * left-end-position: ** 132828 * centisome-position: ** 63.727867...")
(Created page with "Category:gene == Gene SJ04093 == * transcription-direction: ** positive * right-end-position: ** 45345 * left-end-position: ** 14767 * centisome-position: ** 13.174234...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20370 ==
+
== Gene SJ04093 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 148342
+
** 45345
 
* left-end-position:
 
* left-end-position:
−
** 132828
+
** 14767
 
* centisome-position:
 
* centisome-position:
−
** 63.727867    
+
** 13.174234    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HEME-OXYGENASE-DECYCLIZING-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PEROXID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17523]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14240]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15288]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-17352]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8635]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5874]]
+
* [[PWY-7214]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7578]]
+
* [[PWY-7445]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7170]]
+
* [[PWY-5466]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7845]]
+
* [[PWY-6824]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5461]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5917]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=45345}}
−
* [[PWY-5915]]
+
{{#set: left-end-position=14767}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=13.174234   }}
−
* [[PWY-7580]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: nb reaction associated=5}}
−
* [[PWY-7579]]
+
{{#set: nb pathway associated=6}}
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=148342}}
 
−
{{#set: left-end-position=132828}}
 
−
{{#set: centisome-position=63.727867   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=8}}
 

Revision as of 14:53, 5 January 2021

Gene SJ04093

  • transcription-direction:
    • positive
  • right-end-position:
    • 45345
  • left-end-position:
    • 14767
  • centisome-position:
    • 13.174234

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00773&oldid=58340"