Difference between revisions of "SJ00834"

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(Created page with "Category:gene == Gene SJ03315 == * transcription-direction: ** negative * right-end-position: ** 376824 * left-end-position: ** 354540 * centisome-position: ** 67.37269...")
(Created page with "Category:gene == Gene SJ00834 == * transcription-direction: ** positive * right-end-position: ** 537681 * left-end-position: ** 535749 * centisome-position: ** 95.86016...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03315 ==
+
== Gene SJ00834 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 376824
+
** 537681
 
* left-end-position:
 
* left-end-position:
−
** 354540
+
** 535749
 
* centisome-position:
 
* centisome-position:
−
** 67.37269    
+
** 95.86016    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.1.3.37-RXN]]
+
* [[1.14.21.6-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[L-GULONOLACTONE-OXIDASE-RXN]]
+
* [[RXN-13883]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13689]]
+
* [[RXN-13892]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16378]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-4209]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN3O-218]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY3O-6]]
+
* [[PWY66-341]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''14''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY3DJ-35471]]
+
* [[PWY66-3]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''12''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-6387]]
+
* [[PWY-7154]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY0-1261]]
+
* [[PWY-7155]]
−
** '''3''' reactions found over '''12''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7953]]
+
* [[PWY-2541]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''11''' reactions found over '''35''' reactions in the full pathway
−
* [[PWY-6386]]
+
* [[PWY-6075]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=376824}}
+
{{#set: right-end-position=537681}}
−
{{#set: left-end-position=354540}}
+
{{#set: left-end-position=535749}}
−
{{#set: centisome-position=67.37269   }}
+
{{#set: centisome-position=95.86016   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=6}}
 
{{#set: nb pathway associated=6}}
 
{{#set: nb pathway associated=6}}

Latest revision as of 11:09, 18 March 2021

Gene SJ00834

  • transcription-direction:
    • positive
  • right-end-position:
    • 537681
  • left-end-position:
    • 535749
  • centisome-position:
    • 95.86016

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-341
    • 14 reactions found over 18 reactions in the full pathway
  • PWY66-3
    • 12 reactions found over 18 reactions in the full pathway
  • PWY-7154
    • 2 reactions found over 11 reactions in the full pathway
  • PWY-7155
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-2541
    • 11 reactions found over 35 reactions in the full pathway
  • PWY-6075
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00834&oldid=135698"