Difference between revisions of "SJ00836"

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(Created page with "Category:gene == Gene SJ20174 == * transcription-direction: ** negative * right-end-position: ** 605743 * left-end-position: ** 598241 * centisome-position: ** 96.30548...")
(Created page with "Category:gene == Gene SJ07911 == * transcription-direction: ** positive * right-end-position: ** 76789 * left-end-position: ** 69339 * centisome-position: ** 15.4968605...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20174 ==
+
== Gene SJ07911 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 605743
+
** 76789
 
* left-end-position:
 
* left-end-position:
−
** 598241
+
** 69339
 
* centisome-position:
 
* centisome-position:
−
** 96.30548    
+
** 15.4968605    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
* [[3.1.3.68-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[GLUTDEHYD-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15312]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-526]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SUGAR-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY66-399]]
−
* [[GLUTAMATE-DEG1-PWY]]
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[ALACAT2-PWY]]
+
{{#set: right-end-position=76789}}
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=69339}}
−
* [[PWY-5022]]
+
{{#set: centisome-position=15.4968605   }}
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
* [[PWY-7126]]
+
{{#set: nb reaction associated=5}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: nb pathway associated=1}}
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[P162-PWY]]
 
−
** '''7''' reactions found over '''11''' reactions in the full pathway
 
−
* [[GLUTSYNIII-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5675]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY490-3]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=605743}}
 
−
{{#set: left-end-position=598241}}
 
−
{{#set: centisome-position=96.30548   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=2}}
 
−
{{#set: nb pathway associated=10}}
 

Revision as of 20:25, 18 December 2020

Gene SJ07911

  • transcription-direction:
    • positive
  • right-end-position:
    • 76789
  • left-end-position:
    • 69339
  • centisome-position:
    • 15.4968605

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00836&oldid=43483"