Difference between revisions of "SJ00876"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-360 CPD-360] == * common-name: ** d-xylonolactone * smiles: ** c1(c(c(c(co1)o)o)o)=o * inch...")
(Created page with "Category:gene == Gene SJ17313 == * transcription-direction: ** negative * right-end-position: ** 202232 * left-end-position: ** 200697 * centisome-position: ** 75.72357...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-360 CPD-360] ==
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== Gene SJ17313 ==
* common-name:
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* transcription-direction:
** d-xylonolactone
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** negative
* smiles:
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* right-end-position:
** c1(c(c(c(co1)o)o)o)=o
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** 202232
* inchi-key:
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* left-end-position:
** xxbsuzsonoqqgk-flrlbiabsa-n
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** 200697
* molecular-weight:
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* centisome-position:
** 148.115
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** 75.72357   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN]]
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* [[S.japonica_sterols_curated]]
== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
* [[D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN]]
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* [[RXN-13398]]
== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
{{#set: common-name=d-xylonolactone}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: inchi-key=inchikey=xxbsuzsonoqqgk-flrlbiabsa-n}}
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* [[RXN-17252]]
{{#set: molecular-weight=148.115}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7676]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7677]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7740]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6927]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5098]]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5068]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
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{{#set: right-end-position=202232}}
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{{#set: left-end-position=200697}}
 +
{{#set: centisome-position=75.72357    }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=3}}

Revision as of 20:19, 18 December 2020

Gene SJ17313

  • transcription-direction:
    • negative
  • right-end-position:
    • 202232
  • left-end-position:
    • 200697
  • centisome-position:
    • 75.72357

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6927
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5098
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5068
    • 4 reactions found over 7 reactions in the full pathway