Difference between revisions of "SJ00878"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Nonmethylated-Ribosomal-Protein-L11s Nonmethylated-Ribosomal-Protein-L11s] == * common-name: **...") |
(Created page with "Category:gene == Gene SJ00878 == * transcription-direction: ** negative * right-end-position: ** 91451 * left-end-position: ** 80082 * centisome-position: ** 49.763554...") |
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− | [[Category: | + | [[Category:gene]] |
− | == | + | == Gene SJ00878 == |
− | * | + | * transcription-direction: |
− | ** | + | ** negative |
− | == | + | * right-end-position: |
− | * [[ | + | ** 91451 |
− | == Reaction(s) | + | * left-end-position: |
− | == | + | ** 80082 |
− | {{#set: | + | * centisome-position: |
+ | ** 49.763554 | ||
+ | == Organism(s) associated with this gene == | ||
+ | * [[S.japonica_carotenoid_curated]] | ||
+ | == Reaction(s) associated == | ||
+ | * [[1.1.1.8-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[6PGLUCONDEHYDROG-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[G3PD2]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[GLYC3PDEHYDROGBIOSYN-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-9952]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | * [[PWY-6118]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7385]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7411]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[P122-PWY]] | ||
+ | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-7902]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5981]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1319]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5667]] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[OXIDATIVEPENT-PWY]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=91451}} | ||
+ | {{#set: left-end-position=80082}} | ||
+ | {{#set: centisome-position=49.763554 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=5}} | ||
+ | {{#set: nb pathway associated=9}} |
Latest revision as of 11:00, 18 March 2021
Contents
Gene SJ00878
- transcription-direction:
- negative
- right-end-position:
- 91451
- left-end-position:
- 80082
- centisome-position:
- 49.763554
Organism(s) associated with this gene
Reaction(s) associated
- 1.1.1.8-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 6PGLUCONDEHYDROG-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- G3PD2
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- GLYC3PDEHYDROGBIOSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-9952
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6118
- 2 reactions found over 2 reactions in the full pathway
- PWY-7385
- 7 reactions found over 9 reactions in the full pathway
- PWY-7411
- 4 reactions found over 5 reactions in the full pathway
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- PWY-7902
- 2 reactions found over 5 reactions in the full pathway
- PWY-5981
- 3 reactions found over 5 reactions in the full pathway
- PWY0-1319
- 4 reactions found over 4 reactions in the full pathway
- PWY-5667
- 4 reactions found over 4 reactions in the full pathway
- OXIDATIVEPENT-PWY
- 3 reactions found over 3 reactions in the full pathway