Difference between revisions of "SJ00902"

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(Created page with "Category:gene == Gene SJ00780 == * transcription-direction: ** positive * right-end-position: ** 42185 * left-end-position: ** 15261 * centisome-position: ** 9.450237...")
(Created page with "Category:gene == Gene SJ00902 == * transcription-direction: ** negative * right-end-position: ** 98618 * left-end-position: ** 86904 * centisome-position: ** 54.26514...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00780 ==
+
== Gene SJ00902 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 42185
+
** 98618
 
* left-end-position:
 
* left-end-position:
** 15261
+
** 86904
 
* centisome-position:
 
* centisome-position:
** 9.450237    
+
** 54.26514    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.2.1.18-RXN]]
+
* [[RXN-1223]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[1.2.1.27-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-11213]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-2902]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-9958]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5642]]
+
* [[PWYQT-4427]]
** '''1''' reactions found over '''7''' reactions in the full pathway
 
* [[VALDEG-PWY]]
 
** '''6''' reactions found over '''8''' reactions in the full pathway
 
* [[BETA-ALA-DEGRADATION-I-PWY]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7574]]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
* [[P562-PWY]]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-1781]]
 
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
* [[PWY-6373]]
+
{{#set: transcription-direction=negative}}
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=98618}}
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=86904}}
{{#set: right-end-position=42185}}
+
{{#set: centisome-position=54.26514   }}
{{#set: left-end-position=15261}}
 
{{#set: centisome-position=9.450237   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:06, 18 March 2021

Gene SJ00902

  • transcription-direction:
    • negative
  • right-end-position:
    • 98618
  • left-end-position:
    • 86904
  • centisome-position:
    • 54.26514

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWYQT-4427
    • 1 reactions found over 2 reactions in the full pathway