Difference between revisions of "SJ01032"

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(Created page with "Category:gene == Gene SJ16394 == * transcription-direction: ** negative * right-end-position: ** 88420 * left-end-position: ** 45433 * centisome-position: ** 16.07201...")
(Created page with "Category:gene == Gene SJ10476 == * transcription-direction: ** negative * right-end-position: ** 165723 * left-end-position: ** 153673 * centisome-position: ** 39.516106...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16394 ==
+
== Gene SJ10476 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 88420
+
** 165723
 
* left-end-position:
 
* left-end-position:
−
** 45433
+
** 153673
 
* centisome-position:
 
* centisome-position:
−
** 16.07201    
+
** 39.516106    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.1.90-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.1.1.145-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[6PFRUCTPHOS-RXN]]
+
* [[DTDPGLUCDEHYDRAT-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12693]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12747]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12789]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-342]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-350]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-353]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-1042]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-6808]]
−
* [[PWY-1861]]
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7657]]
−
* [[PWY-5484]]
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7104]]
−
* [[GLYCOLYSIS]]
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-6973]]
−
* [[PWY-7385]]
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6974]]
−
* [[ANAGLYCOLYSIS-PWY]]
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-6976]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6953]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7414]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7315]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7318]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6942]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7440]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7814]]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-3221]]
 +
** '''1''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-7413]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7312]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7316]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[DTDPRHAMSYN-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7688]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7301]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6946]]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6944]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-6948]]
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY66-378]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7299]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4821]]
 +
** '''2''' reactions found over '''1''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=88420}}
+
{{#set: right-end-position=165723}}
−
{{#set: left-end-position=45433}}
+
{{#set: left-end-position=153673}}
−
{{#set: centisome-position=16.07201   }}
+
{{#set: centisome-position=39.516106   }}
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=26}}

Revision as of 20:29, 18 December 2020

Gene SJ10476

  • transcription-direction:
    • negative
  • right-end-position:
    • 165723
  • left-end-position:
    • 153673
  • centisome-position:
    • 39.516106

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6808
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7657
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7104
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6973
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-6974
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6976
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6953
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7414
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7315
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7318
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6942
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7440
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7814
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-3221
    • 1 reactions found over n.a reactions in the full pathway
  • PWY-7413
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7312
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7316
    • 1 reactions found over 4 reactions in the full pathway
  • DTDPRHAMSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7688
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7301
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4821
    • 2 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01032&oldid=45128"