Difference between revisions of "SJ01040"

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(Created page with "Category:gene == Gene SJ14176 == * transcription-direction: ** negative * right-end-position: ** 649829 * left-end-position: ** 570267 * centisome-position: ** 79.373634...")
(Created page with "Category:gene == Gene SJ09958 == * transcription-direction: ** positive * right-end-position: ** 110516 * left-end-position: ** 107147 * centisome-position: ** 26.660845...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14176 ==
+
== Gene SJ09958 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 649829
+
** 110516
 
* left-end-position:
 
* left-end-position:
−
** 570267
+
** 107147
 
* centisome-position:
 
* centisome-position:
−
** 79.373634    
+
** 26.660845    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.2.1.113-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* [[ATP-PYROPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[3.2.1.24-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[ATPASE-RXN]]
−
{{#set: right-end-position=649829}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=570267}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=79.373634   }}
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
** Category: [[annotation]]
−
{{#set: nb reaction associated=2}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11396]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-6957]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6502]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6545]]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=110516}}
 +
{{#set: left-end-position=107147}}
 +
{{#set: centisome-position=26.660845   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=8}}
 +
{{#set: nb pathway associated=5}}

Revision as of 20:26, 18 December 2020

Gene SJ09958

  • transcription-direction:
    • positive
  • right-end-position:
    • 110516
  • left-end-position:
    • 107147
  • centisome-position:
    • 26.660845

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6502
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




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