Difference between revisions of "SJ01042"

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(Created page with "Category:gene == Gene SJ12510 == * transcription-direction: ** negative * right-end-position: ** 164288 * left-end-position: ** 135322 * centisome-position: ** 37.82702...")
(Created page with "Category:gene == Gene SJ01042 == * transcription-direction: ** positive * right-end-position: ** 9214 * left-end-position: ** 3094 * centisome-position: ** 1.9576454 =...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12510 ==
+
== Gene SJ01042 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 164288
+
** 9214
 
* left-end-position:
 
* left-end-position:
−
** 135322
+
** 3094
 
* centisome-position:
 
* centisome-position:
−
** 37.82702    
+
** 1.9576454    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ADENYL-KIN-RXN]]
+
* [[DIHYDLIPACETRANS-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGCM]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PGMTh]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PHOSPHOGLUCMUT-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14456]]
+
* [[PYRUVDEH-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-16997]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16998]]
+
* [[RXN-12508]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12583]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1132]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1133]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1134]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
−
* [[PWY-7219]]
+
** '''3''' reactions found over '''1''' reactions in the full pathway
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7218]]
−
* [[PWY-6737]]
+
** '''7''' reactions found over '''4''' reactions in the full pathway
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-5482]]
−
* [[PWY-7238]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLYCOGENSYNTH-PWY]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[GLUCOSE1PMETAB-PWY]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7900]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6731]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5941]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLYCOCAT-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-622]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6317]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-2723]]
 
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3801]]
+
* [[PWY-5537]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7343]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5940]]
+
* [[PWY-6886]]
−
** '''2''' reactions found over '''18''' reactions in the full pathway
+
** '''8''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7902]]
+
* [[PWY-7384]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-5384]]
+
* [[PYRUVDEHYD-PWY]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5661]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=9214}}
−
* [[PWY66-422]]
+
{{#set: left-end-position=3094}}
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
+
{{#set: centisome-position=1.9576454   }}
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=164288}}
 
−
{{#set: left-end-position=135322}}
 
−
{{#set: centisome-position=37.82702   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=7}}
 
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=19}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:09, 18 March 2021

Gene SJ01042

  • transcription-direction:
    • positive
  • right-end-position:
    • 9214
  • left-end-position:
    • 3094
  • centisome-position:
    • 1.9576454

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOLYSIS-TCA-GLYOX-BYPASS
    • 3 reactions found over 1 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • PWY-5482
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PYRUVDEHYD-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01042&oldid=135808"