Difference between revisions of "SJ01052"
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(Created page with "Category:gene == Gene SJ07437 == * transcription-direction: ** positive * right-end-position: ** 11846 * left-end-position: ** 28 * centisome-position: ** 4.182163200e-2 =...") |
(Created page with "Category:gene == Gene SJ04949 == * transcription-direction: ** negative * right-end-position: ** 189145 * left-end-position: ** 177283 * centisome-position: ** 18.359234...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04949 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 189145 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 177283 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 18.359234 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[SHIKIMATE-KINASE-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6163]] |
| − | ** ''' | + | ** '''6''' reactions found over '''5''' reactions in the full pathway |
| − | + | {{#set: transcription-direction=negative}} | |
| − | + | {{#set: right-end-position=189145}} | |
| − | + | {{#set: left-end-position=177283}} | |
| − | + | {{#set: centisome-position=18.359234 }} | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Revision as of 11:02, 15 January 2021
Contents
Gene SJ04949
- transcription-direction:
- negative
- right-end-position:
- 189145
- left-end-position:
- 177283
- centisome-position:
- 18.359234
Organism(s) associated with this gene
Reaction(s) associated
- SHIKIMATE-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6163
- 6 reactions found over 5 reactions in the full pathway
