Difference between revisions of "SJ01133"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ15937 == * transcription-direction: ** negative * right-end-position: ** 97175 * left-end-position: ** 85900 * centisome-position: ** 29.683023...")
(Created page with "Category:gene == Gene SJ01133 == * transcription-direction: ** positive * right-end-position: ** 57332 * left-end-position: ** 29429 * centisome-position: ** 5.3119884...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15937 ==
+
== Gene SJ01133 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 97175
+
** 57332
 
* left-end-position:
 
* left-end-position:
−
** 85900
+
** 29429
 
* centisome-position:
 
* centisome-position:
−
** 29.683023    
+
** 5.3119884    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ACSERLY-RXN]]
+
* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NITRITE-REDUCTASE-CYTOCHROME-RXN]]
+
* [[NUCLEOTIDASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10949]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12726]]
+
* [[RXN-10952]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15838]]
+
* [[RXN-10953]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SULFOCYS-RXN]]
+
* [[RXN-10954]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14473]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17947]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17948]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7253]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5408]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-2301]]
−
* [[CYSTSYN-PWY]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[HOMOCYSDEGR-PWY]]
+
* [[PWY-6363]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-I9]]
+
* [[PWY-4702]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-801]]
+
{{#set: transcription-direction=positive}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=57332}}
−
* [[P303-PWY]]
+
{{#set: left-end-position=29429}}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=5.3119884   }}
−
* [[PWY-6748]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6523]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7084]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6936]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[DENITRIFICATION-PWY]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7870]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=97175}}
 
−
{{#set: left-end-position=85900}}
 
−
{{#set: centisome-position=29.683023   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=13}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:04, 18 March 2021

Gene SJ01133

  • transcription-direction:
    • positive
  • right-end-position:
    • 57332
  • left-end-position:
    • 29429
  • centisome-position:
    • 5.3119884

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2301
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-4702
    • 3 reactions found over 14 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ01133&oldid=133683"