Difference between revisions of "SJ01133"

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(Created page with "Category:gene == Gene SJ19186 == * transcription-direction: ** positive * right-end-position: ** 86457 * left-end-position: ** 67033 * centisome-position: ** 28.988495...")
(Created page with "Category:gene == Gene SJ10078 == * transcription-direction: ** negative * right-end-position: ** 377991 * left-end-position: ** 371551 * centisome-position: ** 93.26875...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19186 ==
+
== Gene SJ10078 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 86457
+
** 377991
 
* left-end-position:
 
* left-end-position:
−
** 67033
+
** 371551
 
* centisome-position:
 
* centisome-position:
−
** 28.988495    
+
** 93.26875    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLUTAMIDOTRANS-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.6.3.31-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ABC-24-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ABC-25-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[GLUTAMIN-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PRIBFAICARPISOM-RXN]]
+
* [[RXN0-5462]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PRICI]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-17900]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[HISTSYN-PWY]]
+
* [[PWY-7210]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[CITRULBIO-PWY]]
+
* [[PWY-7198]]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[GLUTAMINDEG-PWY]]
+
* [[PWY-7184]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6545]]
−
{{#set: right-end-position=86457}}
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=67033}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=28.988495   }}
+
{{#set: right-end-position=377991}}
 +
{{#set: left-end-position=371551}}
 +
{{#set: centisome-position=93.26875   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Revision as of 09:25, 27 August 2019

Gene SJ10078

  • transcription-direction:
    • negative
  • right-end-position:
    • 377991
  • left-end-position:
    • 371551
  • centisome-position:
    • 93.26875

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




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